Core

Log

Generated 2026-04-12 07:16 UTC

[2026-04-07 13:25 KST] corpus curated | Organoid protocol starter corpus

  • Saved manifest organoid_protocols_manifest.tsv.
  • Saved spreadsheet organoid_protocols_papers.xlsx.
  • Prepared a 10-paper starter set of organoid protocol articles for download and ingest.

[2026-04-07 13:26 KST] ingest queued | Generating human intestinal tissue from pluripotent stem cells in vitro

  • Registered raw source raw/sources/mccracken_2011_generating_human_intestinal_tissue_from.pdf.
  • Created source page wiki/sources/mccracken_2011_generating_human_intestinal_tissue_from.md.

[2026-04-07 13:26 KST] ingest queued | Generation of cerebral organoids from human pluripotent stem cells

  • Registered raw source raw/sources/lancaster_2014_generation_of_cerebral_organoids_from.pdf.
  • Created source page wiki/sources/lancaster_2014_generation_of_cerebral_organoids_from.md.

[2026-04-07 13:26 KST] ingest queued | Organoid culture systems for prostate epithelial and cancer tissue

  • Registered raw source raw/sources/drost_2016_organoid_culture_systems_for_prostate.pdf.
  • Created source page wiki/sources/drost_2016_organoid_culture_systems_for_prostate.md.

[2026-04-07 13:26 KST] ingest queued | Tumor organoid-T-cell coculture systems

  • Registered raw source raw/sources/cattaneo_2019_tumor_organoid-t-cell_coculture_systems.pdf.
  • Created source page wiki/sources/cattaneo_2019_tumor_organoid-t-cell_coculture_systems.md.

[2026-04-07 13:26 KST] ingest queued | Establishment of patient-derived cancer organoids for drug-screening applications

  • Registered raw source raw/sources/driehuis_2020_establishment_of_patient-derived_cancer_organoids.pdf.
  • Created source page wiki/sources/driehuis_2020_establishment_of_patient-derived_cancer_organoids.md.

[2026-04-07 13:26 KST] ingest queued | Establishment of human fetal hepatocyte organoids and CRISPR-Cas9-based gene knockin and knockout in organoid cultures from human liver

  • Registered raw source raw/sources/hendriks_2020_establishment_of_human_fetal_hepatocyte.pdf.
  • Created source page wiki/sources/hendriks_2020_establishment_of_human_fetal_hepatocyte.md.

[2026-04-07 13:26 KST] ingest queued | Engineering human hepato-biliary-pancreatic organoids from pluripotent stem cells

  • Registered raw source raw/sources/koike_2021_engineering_human_hepato-biliary-pancreatic_organoids_from.pdf.
  • Created source page wiki/sources/koike_2021_engineering_human_hepato-biliary-pancreatic_organoids_from.md.

[2026-04-07 13:26 KST] ingest queued | Long-term culture, genetic manipulation and xenotransplantation of human normal and breast cancer organoids

  • Registered raw source raw/sources/dekkers_2021_long-term_culture_genetic_manipulation_and.pdf.
  • Created source page wiki/sources/dekkers_2021_long-term_culture_genetic_manipulation_and.md.

[2026-04-07 13:26 KST] ingest queued | Generation of heart-forming organoids from human pluripotent stem cells

  • Registered raw source raw/sources/drakhlis_2021_generation_of_heart-forming_organoids_from.pdf.
  • Created source page wiki/sources/drakhlis_2021_generation_of_heart-forming_organoids_from.md.

[2026-04-07 13:26 KST] ingest queued | Generation of proximal tubule-enhanced kidney organoids from human pluripotent stem cells

  • Registered raw source raw/sources/vanslambrouck_2023_generation_of_proximal_tubule-enhanced_kidney.pdf.
  • Created source page wiki/sources/vanslambrouck_2023_generation_of_proximal_tubule-enhanced_kidney.md.

[2026-04-07 13:31 KST] ingest queued | The generation of kidney organoids by differentiation of human pluripotent cells to ureteric bud progenitor-like cells

  • Registered raw source raw/sources/xia_2014_the_generation_of_kidney_organoids.pdf.
  • Created source page wiki/sources/xia_2014_the_generation_of_kidney_organoids.md.

[2026-04-07 13:31 KST] ingest queued | Generation of kidney organoids from human pluripotent stem cells

  • Registered raw source raw/sources/takasato_2016_generation_of_kidney_organoids_from.pdf.
  • Created source page wiki/sources/takasato_2016_generation_of_kidney_organoids_from.md.

[2026-04-07 13:31 KST] ingest queued | Generation of nephron progenitor cells and kidney organoids from human pluripotent stem cells

  • Registered raw source raw/sources/morizane_2016_generation_of_nephron_progenitor_cells.pdf.
  • Created source page wiki/sources/morizane_2016_generation_of_nephron_progenitor_cells.md.

[2026-04-07 13:31 KST] ingest queued | Culture and establishment of self-renewing human and mouse adult liver and pancreas 3D organoids and their genetic manipulation

  • Registered raw source raw/sources/broutier_2016_culture_and_establishment_of_self-renewing.pdf.
  • Created source page wiki/sources/broutier_2016_culture_and_establishment_of_self-renewing.md.

[2026-04-07 13:31 KST] ingest queued | Generation and assembly of human brain region-specific three-dimensional cultures

  • Registered raw source raw/sources/sloan_2018_generation_and_assembly_of_human.pdf.
  • Created source page wiki/sources/sloan_2018_generation_and_assembly_of_human.md.

[2026-04-07 13:31 KST] ingest queued | Generation and long-term culture of advanced cerebral organoids for studying later stages of neural development

  • Registered raw source raw/sources/giandomenico_2021_generation_and_long-term_culture_of.pdf.
  • Created source page wiki/sources/giandomenico_2021_generation_and_long-term_culture_of.md.

[2026-04-07 13:31 KST] ingest queued | Intestinal organoid cocultures with microbes

  • Registered raw source raw/sources/puschhof_2021_intestinal_organoid_cocultures_with_microbes.pdf.
  • Created source page wiki/sources/puschhof_2021_intestinal_organoid_cocultures_with_microbes.md.

[2026-04-07 13:31 KST] ingest queued | Controlling the polarity of human gastrointestinal organoids to investigate epithelial biology and infectious diseases

  • Registered raw source raw/sources/co_2021_controlling_the_polarity_of_human.pdf.
  • Created source page wiki/sources/co_2021_controlling_the_polarity_of_human.md.

[2026-04-07 13:31 KST] ingest queued | Transplantation of intestinal organoids into a mouse model of colitis

  • Registered raw source raw/sources/watanabe_2022_transplantation_of_intestinal_organoids_into.pdf.
  • Created source page wiki/sources/watanabe_2022_transplantation_of_intestinal_organoids_into.md.

[2026-04-07 13:31 KST] ingest queued | A distal lung organoid model to study interstitial lung disease, viral infection and human lung development

  • Registered raw source raw/sources/matkovicleko_2023_a_distal_lung_organoid_model.pdf.
  • Created source page wiki/sources/matkovicleko_2023_a_distal_lung_organoid_model.md.

[2026-04-08 15:30 KST] ingest queued | Generation of human antral and fundic gastric organoids from pluripotent stem cells

  • Registered raw source raw/sources/broda_2018_generation_of_human_antral_and.pdf.
  • Created source page wiki/sources/broda_2018_generation_of_human_antral_and.md.

[2026-04-08 15:30 KST] ingest queued | Generation of lung organoids from human pluripotent stem cells in vitro

  • Registered raw source raw/sources/miller_2019_generation_of_lung_organoids_from.pdf.
  • Created source page wiki/sources/miller_2019_generation_of_lung_organoids_from.md.

[2026-04-08 15:30 KST] ingest queued | Generation and characterization of hair-bearing skin organoids from human pluripotent stem cells

  • Registered raw source raw/sources/lee_2022_generation_and_characterization_of_hair-bearing.pdf.
  • Created source page wiki/sources/lee_2022_generation_and_characterization_of_hair-bearing.md.

[2026-04-08 15:30 KST] ingest queued | Generating human bone marrow organoids for disease modeling and drug discovery

  • Registered raw source raw/sources/olijnik_2024_generating_human_bone_marrow_organoids.pdf.
  • Created source page wiki/sources/olijnik_2024_generating_human_bone_marrow_organoids.md.

[2026-04-08 15:30 KST] ingest queued | Generation of ‘semi-guided’ cortical organoids with complex neural oscillations

  • Registered raw source raw/sources/fitzgerald_2024_generation_of_semi-guided_cortical_organoids.pdf.
  • Created source page wiki/sources/fitzgerald_2024_generation_of_semi-guided_cortical_organoids.md.

[2026-04-08 15:30 KST] ingest queued | Host circuit engagement of human cortical organoids transplanted in rodents

  • Registered raw source raw/sources/kelley_2024_host_circuit_engagement_of_human.pdf.
  • Created source page wiki/sources/kelley_2024_host_circuit_engagement_of_human.md.

[2026-04-08 15:30 KST] ingest queued | Generating and characterizing human telencephalic brain organoids from stem cell-derived single neural rosettes

  • Registered raw source raw/sources/ullah_2025_generating_and_characterizing_human_telencephalic.pdf.
  • Created source page wiki/sources/ullah_2025_generating_and_characterizing_human_telencephalic.md.

[2026-04-08 15:30 KST] ingest queued | Production of human blood-generating heart-forming organoids and sample preparation for advanced imaging

  • Registered raw source raw/sources/dardano_2025_production_of_human_blood-generating_heart-forming.pdf.
  • Created source page wiki/sources/dardano_2025_production_of_human_blood-generating_heart-forming.md.

[2026-04-08 15:30 KST] ingest queued | CRISPR screens in human neural organoids and assembloids

  • Registered raw source raw/sources/meng_2025_crispr_screens_in_human_neural.pdf.
  • Created source page wiki/sources/meng_2025_crispr_screens_in_human_neural.md.

[2026-04-08 15:43 KST] deep ingest | Organoid protocol corpus

  • Deep-ingested 29 organoid protocol source pages from raw PDFs.
  • Added 9 concept pages and one corpus synthesis page.
  • Refreshed overview, index, and cross-links for the organoid collection.
  • Representative sources in this pass: McCracken 2011, Lancaster 2014, Drost 2016, Cattaneo 2019, Driehuis 2020, Hendriks 2020, Koike 2021, Dekkers 2021, ...

[2026-04-08 17:24 KST] ingest queued | Brainstem Organoids From Human Pluripotent Stem Cells

  • Registered raw source raw/sources/eura_2020_brainstem_organoids_from_human_pluripotent.pdf.
  • Created source page wiki/sources/eura_2020_brainstem_organoids_from_human_pluripotent.md.

[2026-04-08 17:24 KST] ingest queued | Human iPSC-Derived Hippocampal Spheroids: An Innovative Tool for Stratifying Alzheimer Disease Patient-Specific Cellular Phenotypes and Developing Therapies

  • Registered raw source raw/sources/pomeshchik_2020_human_ipsc-derived_hippocampal_spheroids_an.pdf.
  • Created source page wiki/sources/pomeshchik_2020_human_ipsc-derived_hippocampal_spheroids_an.md.

[2026-04-08 17:24 KST] ingest queued | A robust protocol for the generation of human midbrain organoids

  • Registered raw source raw/sources/zagare_2021_a_robust_protocol_for_the.pdf.
  • Created source page wiki/sources/zagare_2021_a_robust_protocol_for_the.md.

[2026-04-08 17:24 KST] ingest queued | Generation of caudal-type serotonin neurons and hindbrain-fate organoids from hPSCs

  • Registered raw source raw/sources/valiulahi_2021_generation_of_caudal-type_serotonin_neurons.pdf.
  • Created source page wiki/sources/valiulahi_2021_generation_of_caudal-type_serotonin_neurons.md.

[2026-04-08 17:24 KST] ingest queued | Protocol for generating reproducible miniaturized controlled midbrain organoids

  • Registered raw source raw/sources/chen_2023_protocol_for_generating_reproducible_miniaturized.pdf.
  • Created source page wiki/sources/chen_2023_protocol_for_generating_reproducible_miniaturized.md.

[2026-04-08 17:24 KST] ingest queued | Generation and long-term culture of human cerebellar organoids from pluripotent stem cells

  • Registered raw source raw/sources/atamian_2024_generation_and_long-term_culture_of.pdf.
  • Created source page wiki/sources/atamian_2024_generation_and_long-term_culture_of.md.

[2026-04-08 17:40 KST] query saved | Brain subregion별 프로토콜 비교

  • Created query page wiki/queries/20260408_174047_brain-subregion-protocol-comparison.md.
  • Compared 9 brain subregion protocols across 13 sources (7 ingested wiki + 6 raw PDFs).
  • Covers: whole cerebral, dorsal/ventral forebrain, telencephalon, cortical, midbrain, brainstem, hippocampus, hindbrain, cerebellum.

[2026-04-09 17:45 KST] query saved | Brain organoid 발달정도·동기화 비교 프레임워크

  • Created query page wiki/queries/20260409_brain-protocol-maturation-synchronization.md.
  • Updates and supersedes the earlier brain subregion query by adding the maturation/reproducibility/fidelity axes that were missing in Round 1.
  • 5-axis framework: region identity / reproducibility (Velasco, Yoon) / fidelity (Bhaduri) / temporal mapping (Kanton) / cross-protocol alignment (He).
  • Resolves the open question from earlier brain-subregion query: "어느 정도 수준의 프로토콜 세분화가 필요한가" — answer is "5 metrics, not just media+day."
  • Identifies remaining gaps: functional synchronization data, subregion-specific reproducibility, long-term variability, patient-specific clone variability.

[2026-04-09 17:30 KST] deep ingest completed | Rounds 2-4 (15 papers)

  • Ran scripts/deep_ingest_round234.py using the new opendataloader-pdf skill.
  • Successfully extracted structured Markdown for all 15 new papers (cached under raw/ingest_cache_round234/).
  • Rewrote all 15 wiki/sources/*.md pages with detailed study design, key findings, distinctive contributions, limitations, relevance to corpus, cross-links, and open questions — based on actual abstract/introduction content rather than stub speculation.
  • Updated wiki/overview.md to reflect 44 deeply-ingested papers total and the new protocol family sections (brain benchmarking, organ+vascular intersections, new organ systems).
  • All Rounds 2-4 papers now status=ingested, deep_ingested=2026-04-09.
  • Corpus now addresses the brain-subregion synchronization question along 5 axes: region identity (Round 1), reproducibility (Velasco/Yoon), fidelity (Bhaduri), maturation timeline (Kanton), and cross-protocol mapping (He).

[2026-04-09 17:00 KST] round 4 ingest queued | vascular intersections + islet maturation

  • Added 4 more papers filling vascular+organ intersection and pancreatic maturation gaps. All 4 downloaded successfully.
  • Registered raw PDFs and created source stubs for:
  • Cakir 2019 — ETV2-driven vascularized brain organoid (Nat Methods, Park lab) — brain+vascular
  • Homan 2019 — flow-enhanced kidney organoid on millifluidic chip (Nat Methods, Lewis lab) — kidney+vascular
  • Wörsdorfer 2019 — MPC-incorporated complex vascularized organoids (Sci Rep, Ergün lab) — multi-lineage+vascular
  • Balboa 2022 — SC-islet functional maturation benchmarked vs primary islets (Nat Biotech, Otonkoski/Balboa) — pancreas
  • Corpus now has 15 papers added across rounds 2-4, covering previously missing areas: spinal cord, vascular, pancreas, inner ear, retinal, brain benchmarking/fidelity, vascular+organ intersections.

[2026-04-09 16:00 KST] round 3 ingest queued | brain fidelity + retinal organoid

  • Added 3 more papers identified from follow-up search on brain reproducibility and retinal gap.
  • Successfully downloaded and registered:
  • Yoon 2019 — cortical organoid reliability (Nat Methods, Pasca lab) — iPSC line variability
  • Bhaduri 2020 — cell stress in cortical organoids (Nature, Kriegstein lab) — fidelity counterpoint to Velasco
  • Kuwahara 2015 — ciliary margin retinal niche (Nat Comms, Sasai lab) — first retinal entry
  • Blocked (need manual download):
  • Sharma 2019 Nat Protoc — hPSC-derived RPE (nature.com blocked for this specific paper)
  • Nakano 2012 Cell Stem Cell — self-organizing optic cup (Cell Press blocked)
  • Capowski 2019 Development — retinal staging (Company of Biologists blocked)
  • Now Brain benchmarking has solid trio: Velasco (reproducibility pro), Yoon (inter-line reliability), Bhaduri (fidelity con). This directly addresses the brain-synchronization query's maturation/variability axes.

[2026-04-09 15:30 KST] round 2 ingest queued | corpus gap-filling

  • Added 8 new queued sources to fill corpus gaps identified in earlier analysis.
  • Downloaded via scripts/download_organoid_round2.sh (5 Cell Press / PNAS papers blocked, require manual download).
  • Successfully registered raw PDFs and created source stubs for:
  • Pereira 2021 — sensorimotor organoid (spinal cord gap, Nat Comms)
  • Wimmer 2019 — blood vessel organoid (vascularization gap, Nat Protoc)
  • Hogrebe 2021 — pancreatic β cell (pancreas gap, Nat Protoc)
  • Koehler 2017 — inner ear organoid (inner ear gap, Nat Biotech)
  • van der Valk 2025 — vestibular inner ear organoid (inner ear update, Nat Protoc)
  • Velasco 2019 — brain organoid reproducibility (brain benchmarking gap, Nature)
  • He 2024 — integrated neural organoid atlas (cross-protocol benchmarking, Nature)
  • Kanton 2019 — organoid scRNA-seq atlas (developmental trajectory, Nature)
  • Pending manual download: Cowan 2020 retinal, Capowski 2019 retinal, Andersen 2020 cortico-motor assembloid, Faustino Martins 2020 neuromuscular, Tanaka 2020 brain organoid benchmarking.
  • These new additions directly address the Velasco-type reproducibility question and He-type cross-protocol comparison that the previous brain-synchronization query flagged as missing.

[2026-04-10 10:32 KST] deep ingest | Brain subregion queued sources

  • Deep-ingested six previously queued organoid sources covering brainstem, hippocampus, midbrain, hindbrain, and cerebellum.
  • Added concept page wiki/concepts/brain-subregion-specific-organoid-protocols.md.
  • Refreshed brain-focused concept pages so subregion-specific protocols show up in the organoid knowledge base.

[2026-04-12 12:37 KST] source parsed | eura_2020_brainstem_organoids_from_human_pluripotent.pdf

  • Parsed raw/sources/eura_2020_brainstem_organoids_from_human_pluripotent.pdf with OpenDataLoader PDF.
  • Saved helper artifacts under raw/derived/opendataloader/eura_2020_brainstem_organoids_from_human_pluripotent.
  • Updated source page wiki/sources/eura_2020_brainstem_organoids_from_human_pluripotent.md.

[2026-04-12 12:39 KST] source parsed | atamian_2024_generation_and_long-term_culture_of.pdf

  • Parsed raw/sources/atamian_2024_generation_and_long-term_culture_of.pdf with OpenDataLoader PDF.
  • Saved helper artifacts under raw/derived/opendataloader/atamian_2024_generation_and_long-term_culture_of.
  • Updated source page wiki/sources/atamian_2024_generation_and_long-term_culture_of.md.

[2026-04-12 12:39 KST] source parsed | balboa_2022_functional_metabolic_and_transcriptional.pdf

  • Parsed raw/sources/balboa_2022_functional_metabolic_and_transcriptional.pdf with OpenDataLoader PDF.
  • Saved helper artifacts under raw/derived/opendataloader/balboa_2022_functional_metabolic_and_transcriptional.
  • Updated source page wiki/sources/balboa_2022_functional_metabolic_and_transcriptional.md.

[2026-04-12 12:40 KST] source parsed | bhaduri_2020_cell_stress_in_cortical.pdf

  • Parsed raw/sources/bhaduri_2020_cell_stress_in_cortical.pdf with OpenDataLoader PDF.
  • Saved helper artifacts under raw/derived/opendataloader/bhaduri_2020_cell_stress_in_cortical.
  • Updated source page wiki/sources/bhaduri_2020_cell_stress_in_cortical.md.

[2026-04-12 12:40 KST] source parsed | broda_2018_generation_of_human_antral_and.pdf

  • Parsed raw/sources/broda_2018_generation_of_human_antral_and.pdf with OpenDataLoader PDF.
  • Saved helper artifacts under raw/derived/opendataloader/broda_2018_generation_of_human_antral_and.
  • Updated source page wiki/sources/broda_2018_generation_of_human_antral_and.md.

[2026-04-12 12:40 KST] source parsed | broutier_2016_culture_and_establishment_of_self-renewing.pdf

  • Parsed raw/sources/broutier_2016_culture_and_establishment_of_self-renewing.pdf with OpenDataLoader PDF.
  • Saved helper artifacts under raw/derived/opendataloader/broutier_2016_culture_and_establishment_of_self-renewing.
  • Updated source page wiki/sources/broutier_2016_culture_and_establishment_of_self-renewing.md.

[2026-04-12 12:40 KST] source parsed | cakir_2019_engineering_of_human_brain.pdf

  • Parsed raw/sources/cakir_2019_engineering_of_human_brain.pdf with OpenDataLoader PDF.
  • Saved helper artifacts under raw/derived/opendataloader/cakir_2019_engineering_of_human_brain.
  • Updated source page wiki/sources/cakir_2019_engineering_of_human_brain.md.

[2026-04-12 12:40 KST] source parsed | cattaneo_2019_tumor_organoid-t-cell_coculture_systems.pdf

  • Parsed raw/sources/cattaneo_2019_tumor_organoid-t-cell_coculture_systems.pdf with OpenDataLoader PDF.
  • Saved helper artifacts under raw/derived/opendataloader/cattaneo_2019_tumor_organoid-t-cell_coculture_systems.
  • Updated source page wiki/sources/cattaneo_2019_tumor_organoid-t-cell_coculture_systems.md.

[2026-04-12 12:40 KST] source parsed | chen_2023_protocol_for_generating_reproducible_miniaturized.pdf

  • Parsed raw/sources/chen_2023_protocol_for_generating_reproducible_miniaturized.pdf with OpenDataLoader PDF.
  • Saved helper artifacts under raw/derived/opendataloader/chen_2023_protocol_for_generating_reproducible_miniaturized.
  • Updated source page wiki/sources/chen_2023_protocol_for_generating_reproducible_miniaturized.md.

[2026-04-12 12:40 KST] source parsed | co_2021_controlling_the_polarity_of_human.pdf

  • Parsed raw/sources/co_2021_controlling_the_polarity_of_human.pdf with OpenDataLoader PDF.
  • Saved helper artifacts under raw/derived/opendataloader/co_2021_controlling_the_polarity_of_human.
  • Updated source page wiki/sources/co_2021_controlling_the_polarity_of_human.md.

[2026-04-12 12:40 KST] source parsed | dardano_2025_production_of_human_blood-generating_heart-forming.pdf

  • Parsed raw/sources/dardano_2025_production_of_human_blood-generating_heart-forming.pdf with OpenDataLoader PDF.
  • Saved helper artifacts under raw/derived/opendataloader/dardano_2025_production_of_human_blood-generating_heart-forming.
  • Updated source page wiki/sources/dardano_2025_production_of_human_blood-generating_heart-forming.md.

[2026-04-12 12:41 KST] source parsed | dekkers_2021_long-term_culture_genetic_manipulation_and.pdf

  • Parsed raw/sources/dekkers_2021_long-term_culture_genetic_manipulation_and.pdf with OpenDataLoader PDF.
  • Saved helper artifacts under raw/derived/opendataloader/dekkers_2021_long-term_culture_genetic_manipulation_and.
  • Updated source page wiki/sources/dekkers_2021_long-term_culture_genetic_manipulation_and.md.

[2026-04-12 12:41 KST] source parsed | drakhlis_2021_generation_of_heart-forming_organoids_from.pdf

  • Parsed raw/sources/drakhlis_2021_generation_of_heart-forming_organoids_from.pdf with OpenDataLoader PDF.
  • Saved helper artifacts under raw/derived/opendataloader/drakhlis_2021_generation_of_heart-forming_organoids_from.
  • Updated source page wiki/sources/drakhlis_2021_generation_of_heart-forming_organoids_from.md.

[2026-04-12 12:41 KST] source parsed | driehuis_2020_establishment_of_patient-derived_cancer_organoids.pdf

  • Parsed raw/sources/driehuis_2020_establishment_of_patient-derived_cancer_organoids.pdf with OpenDataLoader PDF.
  • Saved helper artifacts under raw/derived/opendataloader/driehuis_2020_establishment_of_patient-derived_cancer_organoids.
  • Updated source page wiki/sources/driehuis_2020_establishment_of_patient-derived_cancer_organoids.md.

[2026-04-12 12:41 KST] source parsed | drost_2016_organoid_culture_systems_for_prostate.pdf

  • Parsed raw/sources/drost_2016_organoid_culture_systems_for_prostate.pdf with OpenDataLoader PDF.
  • Saved helper artifacts under raw/derived/opendataloader/drost_2016_organoid_culture_systems_for_prostate.
  • Updated source page wiki/sources/drost_2016_organoid_culture_systems_for_prostate.md.

[2026-04-12 12:41 KST] source parsed | fitzgerald_2024_generation_of_semi-guided_cortical_organoids.pdf

  • Parsed raw/sources/fitzgerald_2024_generation_of_semi-guided_cortical_organoids.pdf with OpenDataLoader PDF.
  • Saved helper artifacts under raw/derived/opendataloader/fitzgerald_2024_generation_of_semi-guided_cortical_organoids.
  • Updated source page wiki/sources/fitzgerald_2024_generation_of_semi-guided_cortical_organoids.md.

[2026-04-12 12:41 KST] source parsed | giandomenico_2021_generation_and_long-term_culture_of.pdf

  • Parsed raw/sources/giandomenico_2021_generation_and_long-term_culture_of.pdf with OpenDataLoader PDF.
  • Saved helper artifacts under raw/derived/opendataloader/giandomenico_2021_generation_and_long-term_culture_of.
  • Updated source page wiki/sources/giandomenico_2021_generation_and_long-term_culture_of.md.

[2026-04-12 12:41 KST] source parsed | he_2024_an_integrated_transcriptomic_cell_atlas.pdf

  • Parsed raw/sources/he_2024_an_integrated_transcriptomic_cell_atlas.pdf with OpenDataLoader PDF.
  • Saved helper artifacts under raw/derived/opendataloader/he_2024_an_integrated_transcriptomic_cell_atlas.
  • Updated source page wiki/sources/he_2024_an_integrated_transcriptomic_cell_atlas.md.

[2026-04-12 12:42 KST] source parsed | hendriks_2020_establishment_of_human_fetal_hepatocyte.pdf

  • Parsed raw/sources/hendriks_2020_establishment_of_human_fetal_hepatocyte.pdf with OpenDataLoader PDF.
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[2026-04-12 12:42 KST] source parsed | hogrebe_2021_generation_of_insulin-producing_pancreatic.pdf

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[2026-04-12 12:42 KST] source parsed | homan_2019_flow-enhanced_vascularization_and_maturation.pdf

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[2026-04-12 12:42 KST] source parsed | kanton_2019_organoid_single-cell_genomic_atlas.pdf

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[2026-04-12 12:43 KST] source parsed | kelley_2024_host_circuit_engagement_of_human.pdf

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[2026-04-12 12:43 KST] source parsed | koehler_2017_generation_of_inner_ear_organoids.pdf

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[2026-04-12 12:43 KST] source parsed | koike_2021_engineering_human_hepato-biliary-pancreatic_organoids_from.pdf

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[2026-04-12 12:43 KST] source parsed | kuwahara_2015_generation_of_a_ciliary.pdf

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[2026-04-12 12:43 KST] source parsed | lancaster_2014_generation_of_cerebral_organoids_from.pdf

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[2026-04-12 12:43 KST] source parsed | lee_2022_generation_and_characterization_of_hair-bearing.pdf

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[2026-04-12 12:43 KST] source parsed | matkovicleko_2023_a_distal_lung_organoid_model.pdf

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[2026-04-12 12:44 KST] source parsed | mccracken_2011_generating_human_intestinal_tissue_from.pdf

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[2026-04-12 12:44 KST] source parsed | meng_2025_crispr_screens_in_human_neural.pdf

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[2026-04-12 12:44 KST] source parsed | miller_2019_generation_of_lung_organoids_from.pdf

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[2026-04-12 12:44 KST] source parsed | morizane_2016_generation_of_nephron_progenitor_cells.pdf

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[2026-04-12 12:44 KST] source parsed | olijnik_2024_generating_human_bone_marrow_organoids.pdf

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[2026-04-12 12:44 KST] source parsed | pereira_2021_human_sensorimotor_organoids_derived.pdf

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[2026-04-12 12:45 KST] source parsed | pomeshchik_2020_human_ipsc-derived_hippocampal_spheroids_an.pdf

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[2026-04-12 12:45 KST] source parsed | puschhof_2021_intestinal_organoid_cocultures_with_microbes.pdf

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[2026-04-12 12:45 KST] source parsed | sloan_2018_generation_and_assembly_of_human.pdf

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[2026-04-12 12:45 KST] source parsed | takasato_2016_generation_of_kidney_organoids_from.pdf

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[2026-04-12 12:45 KST] source parsed | ullah_2025_generating_and_characterizing_human_telencephalic.pdf

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[2026-04-12 12:45 KST] source parsed | valiulahi_2021_generation_of_caudal-type_serotonin_neurons.pdf

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[2026-04-12 12:45 KST] source parsed | vandervalk_2025_generation_and_characterization_of_vestibular.pdf

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[2026-04-12 12:46 KST] source parsed | vanslambrouck_2023_generation_of_proximal_tubule-enhanced_kidney.pdf

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[2026-04-12 12:46 KST] source parsed | velasco_2019_individual_brain_organoids_reproducibly.pdf

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[2026-04-12 12:46 KST] source parsed | watanabe_2022_transplantation_of_intestinal_organoids_into.pdf

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[2026-04-12 12:46 KST] source parsed | wimmer_2019_generation_of_blood_vessel_organoids.pdf

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[2026-04-12 12:46 KST] source parsed | worsdorfer_2019_generation_of_complex_human_organoid.pdf

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[2026-04-12 12:46 KST] source parsed | xia_2014_the_generation_of_kidney_organoids.pdf

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[2026-04-12 12:46 KST] source parsed | yoon_2019_reliability_of_human_cortical.pdf

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[2026-04-12 12:47 KST] source parsed | zagare_2021_a_robust_protocol_for_the.pdf

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